Rollup Version

4.12.1

Operating System (or Browser)

StackBlitz / REPL

Node Version (if applicable)

No response

Link To Reproduction

• https://rollupjs.org/repl/?version=4.12.1&shareable=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
• https://stackblitz.com/edit/rollup-repro-9wagvo?file=src%2Fmain.js

Expected Behaviour

// main.js
import './1-hash.js'
import './2-hash.js'
import './3-hash.js'

// sub.js
import './1-hash.js'
import './3-hash.js'

// 1-hash.js
console.log('1');

// 2-hash.js
console.log('2');

// 3-hash.js
console.log('3');

Actual Behaviour

// main.js
import './3-hash.js'

console.log('2');

// sub.js
import './3-hash.js'

// 3-hash.js
console.log('1');

console.log('3');

Additional Information

Maybe this is a duplicate of #3888. I made a different issue as this might be easier to fix than the repro in #3888. Feel free to close this one if it's better to be merged in to #3888.

refs vitejs/vite#7168, vitejs/vite#6375